Other Scientific Software

A selected list of software licensed and in use at the Translational Informatics Division. Please feel free to contact us for further information.

Cytoscape

An Open Source Platform for Complex-Network Analysis and Visualization. This powerful and popular tool has grown from the bioinformatics community to encompass many domains. CARLSBAD (NIH R21 award) involves developing a Cytoscape plugin for bioactivity data mining and network visualization.

CaffeineFix

Chemical nomenclature spelling correction text analytics software from NextMove Software. Source code toolkit adaptable to diverse text processing uses.

Knime

Knime is an open, integrated, graphical workflow development and application environment, with a diverse selection of high quality data processing components from an active community of developers and users.